Past publications

2016

Branham, M. S., Hsu, W. C., Yerci, S., Loomis, J., Boriskina, S. V., Hoard, B. R., & Chen, G. (2016). Empirical Comparison of Random and Periodic Surface Light‐Trapping Structures for Ultrathin Silicon Photovoltaics. Advanced Optical Materials, 4(6), 858-863. https://onlinelibrary.wiley.com/doi/abs/10.1002/adom.201500667.

Han, S. J., Ghosh, S., Abudayyeh, O. K., Hoard, B. R., Culler, E. C., Bonilla, J. E., & Han, S. E. (2016). Symmetry-breaking nanostructures on crystalline silicon for enhanced light trapping in thin film solar cells. Optics Express, 24(26), A1586-A1596. https://www.osapublishing.org/oe/abstract.cfm?uri=oe-24-26-A1586.

Matanovic, K. Artyushkova, M. B. Strand, M. J. Dzara, S. Pylypenko, and P. Atanassov, Core Level Shifts of Hydrogenated Pyridinic and Pyrrolic Nitrogen in the Nitrogen-Containing Graphene-Based Electrocatalysts: In-Plane vs Edge Defects, J. Phys. Chem. C120(51), 29225-29232 (2016).

Asset, A. Ray, T. Sakamoto, M. Padilla, I. Matanovic, K. Artyushkova, A. Serov, F. Mailllard, M. Chatenet, K. Asazawa, and P. Atanassov, Highly active and selective nickel molybdenum catalysts for direct hydrazine fuel cells, Electrochim Acta, 2015, 420-426 (2016).

Taek Chung, Y.-K. Choe, U. Martinez, J. H. Dumont, A. Mohanty, C. Bae, I. Matanovic, Y.S. Kim, Effect of Organic Cations on Hydrogen Oxidation Reaction of Carbon Supported Platinum, J. Electrochem. Soc., 163,14, F1503-F1509 (2016).

Taek Chung, U. Martinez, I. Matanovic, and Y-S. Kim, Cation–Hydroxide–Water Coadsorption Inhibits the Alkaline Hydrogen Oxidation Reaction, J. Phys. Chem. Lett., 7(22), 4464–4469 (2016).

Reshetenko, A. Serov, K. Artyushkova, I. Matanovic, S. Stariha and P. Atanassov, Tolerance of non-platinum group metals cathodes proton exchange membrane fuel cells to air contaminants, J. Power Sources, 324, 556 (2016).

Perry III, S. Babanova, I. Matanovic, A. Neumman, A. Serov, K. Artyushkova, and P. Atanassov, Evaluation of Pt Alloys as Electrocatalysts for Oxalic Acid Oxidation: A Combined Experimental and Computational Study, J.Electrochem. Soc., 163, H787-H795 (2016).

Matanovic, S. Babanova, M. S. Chavez, and P. Atanassov, Protein-Support Interactions for Rationally Designed Bilirubin Oxidase Based Cathode: a Computational Study, J. Phys. Chem. B, 120, 3634–3641 (2016).

E. Hjelm, K. E. Garcia, S. Babanova, K. Artyushkova, I. Matanovic, S. Banta, and P. Atanassov, Functional Interfaces for Biomimetic Energy Harvesting: CNTs-DNA Matrix for Enzyme Assembly, Biochim. Biophys. Acta,1857, 612-620 (2016).

Serov, T. Asset, M. Padilla, I. Matanovic, U. Martinez, A. Roy, K. Artyushkova, M. Chatenet, F. Maillard, D. Bayer, C. Cremers and P. Atanassov, Highly-active Pd–Cu electrocatalysts for oxidation of ubiquitous oxygenated fuels, Appl. Catal. B, 191, 76-85 (2016).

Coutsias, E.A., Lexa, K.W., Wester, M.J., Pollock, S.N. and Jacobson, M.P., 2016. Exhaustive Conformational Sampling of Complex Fused Ring Macrocycles Using Inverse Kinematics. Journal of Chemical Theory and Computation, 12(9), pp.4674-4687.

Xie, C., Jiang, B., Yang, M. and Guo, H., 2016. State-to-State Mode Specificity in F+ CHD3→ HF/DF+ CD3/CHD2 Reaction. The Journal of Physical Chemistry A, 120(33), pp.6521-6528.

Manjavacas, A., 2016. Anisotropic optical response of nanostructures with balanced gain and loss. ACS Photonics, 3(7), pp.1301-1307.

Benson, B.W., Iyer, S.R., Kemper, K. and Zhao, J., 2016. Director Networks and Credit Ratings.

Qi, X., Baragiola, B.Q., Jessen, P.S. and Deutsch, I.H., 2016. Dispersive response of atoms trapped near the surface of an optical nanofiber with applications to quantum nondemolition measurement and spin squeezing. Physical Review A, 93(2), p.023817.

Shahbazikhah, P., Kalivas, J.H., Andries, E. and O'Loughlin, T., 2016. Using the L1 norm to select basis set vectors for multivariate calibration and calibration updating. Journal of Chemometrics.

Martin, T.D., Hill, E.H., Whitten, D.G., Chi, E.Y. and Evans, D.G., 2016. Oligomeric Conjugated Polyelectrolytes Display Site-Preferential Binding to an MS2 Viral Capsid. Langmuir, 32(47), pp.12542-12551.

Song, H., Li, A. and Guo, H., 2016. Rotational and Isotopic Effects in the H2+ OH+→ H+ H2O+ Reaction. The Journal of Physical Chemistry A.

Ard, S.G., Johnson, R.S., Martinez, O., Shuman, N.S., Guo, H., Troe, J. and Viggiano, A.A., 2016. Analysis of the Pressure and Temperature Dependence of the Complex-Forming Bimolecular Reaction CH3OCH3+ Fe+. The Journal of Physical Chemistry A.

Ox, J., 2016. Color Systems are Categories that Carry Meaning in Visualizations: A Conceptual Metaphor Theory Approach. Electronic Imaging, 2016(16), pp.1-9.

Manavi, K., Jacobson, B., Hoard, B. and Tapia, L., 2016. Influence of model resolution on geometric simulations of antibody aggregation. Robotica, 34(08), pp.1754-1776.

Hoard, B., Jacobson, B., Manavi, K. and Tapia, L., 2016. Extending rule-based methods to model molecular geometry and 3D model resolution. BMC Systems Biology, 10(2), p.48.

Vangara, R., Brown, D.C.R., van Swol, F. and Petsev, D.N., 2017. Electrolyte solution structure and its effect on the properties of electric double layers with surface charge regulation. Journal of Colloid and Interface Science, 488, pp.180-189.

Tencate, A., Kalivas, J.H. and Andries, E., 2016. Penalty processes for combining roughness and smoothness in spectral multivariate calibration. Journal of Chemometrics, 30(4), pp.144-152.

Zhao, B., Sun, Z. and Guo, H., 2016. A reactant-coordinate-based approach to state-to-state differential cross sections for tetratomic reactions. The Journal of Chemical Physics, 145(18), p.184106.

Cavanagh, J.F. and Castellanos, J., 2016. Identification of canonical neural events during continuous gameplay of an 8-bit style video game. NeuroImage, 133, pp.1-13.

Han, H., Alday, B., Shuman, N.S., Wiens, J.P., Troe, J., Viggiano, A.A. and Guo, H., 2016. Calculations of the active mode and energetic barrier to electron attachment to CF 3 and comparison with kinetic modeling of experimental results. Physical Chemistry Chemical Physics, 18(45), pp.31064-31071.

Cowen, B.J. and El-Genk, M.S., 2016. Probability-based threshold displacement energies for oxygen and silicon atoms in α-quartz silica. Computational Materials Science, 117, pp.164-171.

Kerketta, R., Halász, Á.M., Steinkamp, M.P., Wilson, B.S. and Edwards, J.S., 2016. Effect of spatial inhomogeneities on the membrane surface on receptor dimerization and signal initiation. Frontiers in Cell and Developmental Biology, 4.

Chen, T., Lehr, J., Lavrova, O. and Martinez-Ramonz, M., 2016, July. Distribution-level peak load prediction based on Bayesian Additive Regression Trees. In Power and Energy Society General Meeting (PESGM), 2016 (pp. 1-5). IEEE.

Song, H., Lu, Y., Li, J., Yang, M. and Guo, H., 2016. Mode specificity in the OH+ CHD3 reaction: Reduced-dimensional quantum and quasi-classical studies on an ab initio based full-dimensional potential energy surface. The Journal of chemical physics, 144(16), p.164303.

Manjavacas, A., Rodríguez-Fortuño, F.J., de Abajo, F. and Zayats, A.V., 2016. Lateral Casimir force on a rotating particle near a planar surface. arXiv preprint arXiv:1612.03733.

Cowen, B.J. and El-Genk, M.S., 2016. Bond-order reactive force fields for molecular dynamics simulations of crystalline silica. Computational Materials Science, 111, pp.269-276.

Lin, J., Wester, M.J., Graus, M.S., Lidke, K.A. and Neumann, A.K., 2016. Nanoscopic cell-wall architecture of an immunogenic ligand in Candida albicans during antifungal drug treatment. Molecular biology of the cell, 27(6), pp.1002-1014.

Martinez-Herrero, R. and Manjavacas, A., 2016. Basis for paraxial surface-plasmon-polariton packets. Physical Review A, 94(6), p.063829.

Moradi, C.P., Xie, C., Kaufmann, M., Guo, H. and Douberly, G.E., 2016. Two-center three-electron bonding in ClNH3 revealed via helium droplet infrared laser Stark spectroscopy: Entrance channel complex along the Cl+ NH3→ ClNH2+ H reaction. The Journal of chemical physics, 144(16), p.164301.

Abaie, B., Mobini, E., Karbasi, S., Hawkins, T., Ballato, J. and Mafi, A., 2016. Random lasing in an Anderson localizing optical fiber. arXiv preprint arXiv:1612.03835.

Kolb, B. and Guo, H., 2016. Communication: Energy transfer and reaction dynamics for DCl scattering on Au (111): An ab initio molecular dynamics study.

Lin, S., Gao, H.W. and Peng, Z., 2016, May. High-fidelity, high-performance full-wave computational algorithms for intra-system EMI analysis of IC and electronics. In Signal and Power Integrity (SPI), 2016 IEEE 20th Workshop on (pp. 1-4). IEEE.

Lushnikov, P.M., 2016, September. Nonlinear combining of multiple laser beams in multimode optical fiber. In Australian Conference on Optical Fibre Technology (pp. JM6A-15). Optical Society of America.

Shao, Y., Wang, S. and Peng, Z., 2016, March. Hierarchical modeling and scalable algorithms for in-situ characterization of 3D IC packages. In 2016 IEEE/ACES International Conference on Wireless Information Technology and Systems (ICWITS) and Applied Computational Electromagnetics (ACES) (pp. 1-2). IEEE.

Shi, Y. and Lee, J.H., 2016. Sample size calculations for group randomized trials with unequal group sizes through Monte Carlo simulations. Statistical Methods in Medical Research, p.0962280216682775.

Wheeler, L.B., Galewsky, J., Herold, N. and Huber, M., 2016. Late Cenozoic surface uplift of the southern Sierra Nevada (California, USA): A paleoclimate perspective on lee-side stable isotope paleoaltimetry. Geology, 44(6), pp.451-454.

Winner, K.R.K., Steinkamp, M.P., Lee, R.J., Swat, M., Muller, C.Y., Moses, M.E., Jiang, Y. and Wilson, B.S., 2016. Spatial modeling of drug delivery routes for treatment of disseminated ovarian cancer. Cancer research, 76(6), pp.1320-1334.

Fleharty, M. E., van Swol, F., & Petsev, D. N. (2016). Solvent Role in the Formation of Electric Double Layers with Surface Charge Regulation: A Bystander or a Key Participant?. Physical Review Letters, 116(4), 048301.

Lin, J., Wester, M. J., Graus, M. S., Lidke, K. A., & Neumann, A. K. (2016). Nanoscopic cell wall architecture of an immunogenic ligand in Candida albicans during antifungal drug treatment. Molecular Biology of the Cell, mbc-E15.

2015

Hoard, B., Jacobson, B., Manavi, K., and Tapia, L. (2015). Extending rule-based methods to model molecular geometry. 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). https://ieeexplore.ieee.org/abstract/document/7359748.

Han, S. J., Ghosh, S., Hoard, B. R., Culler, E. C., Bonilla, J. E., Martin, E. J., & Han, S. E. (2016). Light trapping enhancement in thin film solar cells by breaking symmetry in nanostructures. 2016 IEEE 43rd Photovoltaic Specialists Conference (PVSC). https://ieeexplore.ieee.org/abstract/document/7750322.

Ghosh, S., Han, S. J., Hoard, B. R., Culler, E. C., Bonilla, J. E., Martin, E. J., & Han, S. E. (2015). Symmetry-breaking nanostructures for enhanced light-trapping in thin film solar cells. 2015 IEEE 42nd Photovoltaic Specialists Conference (PVSC). https://ieeexplore.ieee.org/abstract/document/7356305.

Noormofidi, V., Atlas, S. R., & Duan, H. (2015). Performance Analysis of an Astrophysical Simulation Code on the Intel Xeon Phi Architecture. arXiv preprint arXiv:1510.02163.

Svihla, V., Wester, M. J., & Linn, M. C. (2015). Distributed revisiting: An analytic for retention of coherent science learning. Journal of Learning Analytics, 2(2), 75-101.

Chen, T., Lavrova, O., & Lehr, J. (2015, November). The optimal planning and dynamic operation of distributed generation method based on modified multiobjective optimization in power distribution system. In Green Energy and Systems Conference (IGESC), 2015 IEEE (pp. 49-54). IEEE.

Cowen, B. J., & El-Genk, M., (2015). Bond-order reactive force fields for molecular dynamics simulations of crystalline silica. Computational Materials Science, 111 269-276.

Ogasawara, Y., Torrez-Martinez, N., Aragon, A. D., Yackley, B. J., Weber, J. A., Sundararajan, A., ... & Melançon, C. E. (2015). High-Quality Draft Genome Sequence of Actinobacterium Kibdelosporangium sp. MJ126-NF4, Producer of Type II Polyketide Azicemicins, Using Illumina and PacBio Technologies. Genome Announcements, 3(2), e00114-15.

Pryor, M. M., Steinkamp, M. P., Halasz, A. M., Chen, Y., Yang, S., Smith, M. S., ... & Wilson, B. S. (2015). Orchestration of ErbB3 signaling through hetero and homo-interactions. Molecular Biology of the Cell, mbc-E14.

Porteous, A. B., Habbit, R., III, J. D., Poroseva, S. V., & Murman, S. M. (2015). Simulations of Incompressible Separated Turbulent Flows around Two-Dimensional Bodies with URANS Models in OpenFOAM. In 22nd AIAA Computational Fluid Dynamics Conference (p. 2609).

Echavarria, C. M. L., & Poroseva, S. V. Computational Analysis of the Blade Number Effect on the Performance of a Ducted Propeller. in AIAA Atmospheric Flight Mechanics Conference.

Poroseva, S. V., Fernandez, J. D. C., & Murman, S. M. (2015). RANS Simulations of a Channel Flow with a New Velocity/Pressure-Gradient Model. In 22nd AIAA Computational Fluid Dynamics Conference (p. 3067).

Poroseva, S. V., Kaiser, B. E., Sillero, J. A., & Murman, S. M. (2015). Validation of a closing procedure for fourth-order RANS turbulence models with DNS data in an incompressible zero-pressure-gradient turbulent boundary layer. International Journal of Heat and Fluid Flow, 56, 71-79.

Loring, T. A. (2015). K-theory and pseudospectra for topological insulators. Annals of Physics, 356, 383-416.

Hauser, K., Essuman, B., Coutsias, E., Garcia-Diaz, M., & Simmerling, C. (2015). A Human Transcription Factor in Search Mode. Biophysical Journal, 108(2), 397a.

Perez-Arriaga, M., Wilson, S., Williams, K. P., Schoeniger, J., Waymire, R. L., & Powell, A. J. (2015). Omics Metadata Management Software (OMMS). Bioninformation, 11(4)

States, J. (n.d.). (2015). Arsenic Interaction with Zinc Finger Motifs. Arsenic: Exposure Sources, health risks, and mechanisms of toxicity (Vol. 1).

Schriener, T. M., & El-Genk, M. S. (2015). Convection heat transfer of NaK-78 liquid metal in a circular tube and a tri-lobe channel. International Journal of Heat and Mass Transfer, 86, 234-243.

Bu, L., & Katju, V. (2015). Early evolutionary history and genomic features of gene duplicates in the human genome. BMC Genomics, 16(1), 621.

Kazemi, A., Klein, B., Nami, M., Kim, J. O., Allen, M. S., Allen, J. W., ... & Krishna, S. (2015). Investigation of plasmonic enhancement in a quantum dot-in-a-well structure. In SPIE OPTO (pp. 937019-937019). International Society for Optics and Photonics.

Tsai, J. W., Simonetti, J. H., Akukwe, B., Bear, B., Cutchin, S. E., Dowell, J., ... & Kavic, M. (2015). Observations of Giant Pulses from Pulsar B0950+ 08 Using LWA1. The Astronomical Journal, 149(2), 65.

Obenberger, K. S., Taylor, G. B., Hartman, J. M., Clarke, T. E., Dowell, J., Dubois, A., ... & Schinzel, F. K. (2015). Monitoring the Sky with the Prototype All-Sky Imager on the LWA1. Journal of Astronomical Instrumentation, 1550004.

Fleharty, M. E., van Swol, F., & Petsev, D. N. (2015). Charge regulation at semiconductor-electrolyte interfaces. Journal of Colloid and Interface Science, 449, 409-415.

Falkovich, G., & Vladimirova, N. (2015). Cascades in nonlocal turbulence. Physical Review E, 91(4), 041201.

López, C. A., Sethi, A., Goldstein, B., Wilson, B. S., & Gnanakaran, S. (2015). Membrane-Mediated Regulation of the Intrinsically Disordered CD3ϵ Cytoplasmic Tail of the TCR. Biophysical Journal, 108(10), 2481-2491.

Serov, A., Andersen, N. I., Roy, A. J., Matanovic, I., Artyushkova, K., & Atanassov, P. (2015). CuCo₂O₄ ORR/OER Bi-Functional Catalyst: Influence of Synthetic Approach on Performance. Journal of The Electrochemical Society, 162(4), F449-F454.

Matanovic, I., Babanova, S., Perry III, A., Serov, A., Artyushkova, K., & Atanassov, P. (2015). Bio-inspired design of electrocatalysts for oxalate oxidation: a combined experimental and computational study of Mn–N–C catalysts. Physical Chemistry Chemical Physics, 17(20), 13235-13244.

Babanova, S., Matanovic, I., Chavez, M. S., & Atanassov, P. (2015). Role of Quinones in Electron Transfer of PQQ–Glucose Dehydrogenase Anodes Mediation or Orientation Effect. Journal of the American Chemical Society, 137(24), 7754-7762.

Cowen, B. J., & El-Genk, M. S. (2015). On force fields for molecular dynamics simulations of crystalline silica. Computational Materials Science, 107, 88-101.

Nami, M., & Feezell, D. (2015). Optical properties of Ag-coated GaN/InGaN axial and core–shell nanowire light-emitting diodes. Journal of Optics, 17(2), 025004.

Branham, M. S., Hsu, W. C., Yerci, S., Loomis, J., Boriskina, S. V., Hoard, B. R., ... & Chen, G. (2015). 15.7% efficient 10-μm-thick crystalline silicon solar cells using periodic nanostructures. Advanced Materials, 27(13), 2182-2188.

Cai, T., & Han, S. E. (2015). Effect of symmetry in periodic nanostructures on light trapping in thin film solar cells. JOSA B, 32(11), 2264-2270.

Han, S. E. (2015). Suppression of infrared absorption in nanostructured metals by controlling faraday inductance and electron path length (submitted).

Perez-Arriaga, M.O., Wilson, S., Williams, K.P., Schoeniger, J., Powell, A.J. (2015). Omics metadata management software. Bioinformation. 30;11(4):165-72.

Hudson, C. M., Kirton, E., Hutchinson, M. I., Redfern, J. L., Simmons, B., Ackerman, E., Singh, S., Williams, K. P., Natvig D. O., & Powell, A. J. (2015). Lignin-Modifying Processes in the Rhizosphere of Aridland Grasses. Environmental Microbiology.

Guo, L., Han, H., Ma, J., & Guo, H. (2015). Quantum Dynamics of Vinylidene Photodetachment on an Accurate Global Acetylene-Vinylidene Potential Energy Surface. The Journal of Physical Chemistry A, 119(31), 8488-8496.

Majumder, M., Hegger, S. E., Dawes, R., Manzhos, S., Wang, X. G., Tucker Jr, C., ... & Guo, H. (2015). Explicitly correlated MRCI-F12 potential energy surfaces for methane fit with several permutation invariant schemes and full-dimensional vibrational calculations. Molecular Physics, (ahead-of-print), 1-11.

Ard, S. G., Johnson, R. S., Melko, J. J., Martinez, O., Shuman, N. S., Ushakov, V. G., ... & Viggiano, A. A. (2015). Spin-inversion and spin-selection in the reactions FeO++ H 2 and Fe++ N 2 O. Physical Chemistry Chemical Physics, 17(30), 19709-19717.

Zou, L., Li, J., Wang, H., Ma, J., & Guo, H. (2015). State-Resolved Quantum Dynamics of Photodetachment of HCO2−/DCO2− on an Accurate Global Potential Energy Surface. The Journal of Physical Chemistry A.

Song, H., & Guo, H. (2015). Vibrational and Rotational Mode Specificity in The Cl+ H2O→ HCl+ OH Reaction: A Quantum Dynamical Study. The Journal of Physical Chemistry A.

Huang, Y. H., Li, J., Guo, H., & Lee, Y. P. (2015). Infrared spectrum of the simplest Criegee intermediate CH2OO at resolution 0.25 cm− 1 and new assignments of bands 2ν9 and ν5. The Journal of chemical physics, 142(21), 214301.

Li, J., Chen, J., Zhao, Z., Xie, D., Zhang, D. H., & Guo, H. (2015). A permutationally invariant full-dimensional ab initio potential energy surface for the abstraction and exchange channels of the H+ CH4 system. The Journal of Chemical Physics, 142(20), 204302.

Li, J., Jiang, B., Song, H., Ma, J., Zhao, B., Dawes, R., & Guo, H. (2015). From Ab Initio Potential Energy Surfaces to State Resolved Reactivities: The X+ H2O↔ HX+ OH (X= F, Cl, and O (3P)) Reactions. The Journal of Physical Chemistry A.

Martinez Jr, O., Sanchez, J. C., Ard, S. G., Li, A., Melko, J. J., Shuman, N. S., ... & Viggiano, A. A. (2015). Selected-ion flow tube temperature-dependent measurements for the reactions of O2+ with N atoms and N2+ with O atoms. The Journal of chemical physics, 142(15), 154305.

Han, H., Song, H., Li, J., & Guo, H. (2015). Near Spectroscopically Accurate Ab Initio Potential Energy Surface for NH4+ and Variational Calculations of Low-Lying Vibrational Levels. The Journal of Physical Chemistry A, 119(14), 3400-3406.

Zhou, L., Xie, D., & Guo, H. (2015). Signatures of non-adiabatic dynamics in the fine-structure state distributions of the OH (X̃/Ã) products in the B-band photodissociation of H2O. The Journal of chemical physics, 142(12), 124317.

Xie, C., Zhu, X., Ma, J., Yarkony, D. R., Xie, D., & Guo, H. (2015). Communication: On the competition between adiabatic and nonadiabatic dynamics in vibrationally mediated ammonia photodissociation in its A band. The Journal of chemical physics, 142(9), 091101.

Li, A., & Guo, H. (2015). Prediction of mode specificity in 1, 3-dipolar cycloadditions using the Sudden Vector Projection model. Chemical Physics Letters, 624, 102-106.

Li, J., Corchado, J. C., Espinosa-Garcia, J., & Guo, H. (2015). Final state-resolved mode specificity in HX+ OH→ X+ H2O (X= F and Cl) reactions: A quasi-classical trajectory study. The Journal of chemical physics, 142(8), 084314.

Whitehill, A. R., Jiang, B., Guo, H., & Ono, S. (2015). SO 2 photolysis as a source for sulfur mass-independent isotope signatures in stratospehric aerosols. Atmospheric Chemistry and Physics, 15(4), 1843-1864.

Xie, W., Liu, L., Sun, Z., Guo, H., & Dawes, R. (2015). State-to-state reaction dynamics of 18O+ 32O2 studied by a time-dependent quantum wavepacket method. The Journal of chemical physics, 142(6), 064308.

Zhao, B., & Guo, H. (2015). Modulations of Transition-State Control of State-to-State Dynamics in the F+ H2O→ HF+ OH Reaction. The Journal of Physical Chemistry Letters, 6(4), 676-680.

Lin, S., Huang, J., Gao, X., Ye, X., & Guo, H. (2015). Theoretical Insight into the Reaction Mechanism of Ethanol Steam Reforming on Co (0001). The Journal of Physical Chemistry C, 119(5), 2680-2691.

Song, H., & Guo, H. (2015). Mode Specificity in the HCl+ OH→ Cl+ H2O Reaction: Polanyi’s Rules vs Sudden Vector Projection Model. The Journal of Physical Chemistry A, 119(5), 826-831.

Li, J., Song, H., & Guo, H. (2015). Insights into the bond-selective reaction of Cl+ HOD (n OH)→ HCl+ OD. Physical Chemistry Chemical Physics, 17(6), 4259-4267.

Nakajima, M., Yue, Q., Li, J., Guo, H., & Endo, Y. (2015). An experimental and theoretical study on rotational constants of vibrationally excited CH 2 OO. Chemical Physics Letters, 621, 129-133.

2014

Itano, M. S., Graus, M. S., Pehlke, C., Wester, M. J., Liu, P., Lidke, K. A., ... & Neumann, A. K. (2014). Super-resolution imaging of C-type lectin spatial rearrangement within the dendritic cell plasma membrane at fungal microbe contact sites. Frontiers in physics, 2.

Graus, M. S., Pehlke, C., Wester, M. J., Davidson, L. B., Steinberg, S. L., & Neumann, A. K. (2014). A new tool to quantify receptor recruitment to cell contact sites during host-pathogen interaction.

Yim, H. S., Cho, Y. S., Guang, X., Kang, S. G., Jeong, J. Y., Cha, S. S., ... & Kim, B. C. (2014). Minke whale genome and aquatic adaptation in cetaceans. Nature genetics, 46(1), 88-92.

Edwards, J. S., Atlas, S. R., Wilson, S. M., Cooper, C. F., Luo, L., & Stidley, C. A. (2014, June). Integrated statistical and pathway approach to next-generation sequencing analysis: a family-based study of hypertension. In BMC proceedings (Vol. 8, No. Suppl 1, p. S104). BioMed Central Ltd.

Jun, J., Cho, Y. S., Hu, H., Kim, H. M., Jho, S., Gadhvi, P., ... & Bhak, J. (2014). Whole genome sequence and analysis of the Marwari horse breed and its genetic origin. BMC genomics, 15(Suppl 9), S4.

Porteous, A. B., Kaiser, B. E., Poroseva, S. V., Bond, C. R., & Hovsapian, R. O. (2014). Wake Flow Simulations for a Mid-Sized Rim Driven Wind Turbine. In the 32nd AIAA Applied Aerodynamics Conference.

Gomez, S., Graves, B. J., & Poroseva, S. V. (2014). On the Accuracy of RANS Simulations of 2D Boundary Layers with OpenFOAM. In the 44th AIAA Fluid Dynamics Conference.

Loring, T. A. (2014). Computing a logarithm of a unitary matrix with general spectrum. Numerical Linear Algebra with Applications, 21(6), 744-760.

Dubay, S. G., & Witt, C. C. (2014, January). Differential high-altitude adaptation and limited gene flow across a mid-elevation hybrid zone in birds. In INTEGRATIVE AND COMPARATIVE BIOLOGY (Vol. 54, pp. E54-E54). JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA: OXFORD UNIV PRESS INC.

Vickers, C. J., González-Páez, G. E., Litwin, K. M., Umotoy, J. C., Coutsias, E. A., & Wolan, D. W. (2014). Selective inhibition of initiator versus executioner caspases using small peptides containing unnatural amino acids. ACS chemical biology, 9(10), 2194-2198.

Valone, S. M., Atlas, S. R., & Baskes, M. I. (2014). Fragment Hamiltonian model potential for nickel: metallic character and defects in crystalline lattices. Modelling and Simulation in Materials Science and Engineering, 22(4), 045013.

Helmboldt, J. F., Ellingson, S. W., Hartman, J. M., Lazio, T. J. W., Taylor, G. B., Wilson, T. L., & Wolfe, C. N. (2014). All‐sky imaging of meteor trails at 55.25 MHz with the first station of the Long Wavelength Array. Radio Science, 49(3), 157-180.

Obenberger, K. S., Hartman, J. M., Taylor, G. B., Craig, J., Dowell, J., Helmboldt, J. F., ... & Wilson, T. L. (2014). Limits on GRB Prompt Radio Emission Using the LWA1. arXiv preprint arXiv:1403.3674.

Obenberger, K. S., Taylor, G. B., Hartman, J. M., Dowell, J., Ellingson, S. W., Helmboldt, J. F., ... & Wilson, T. L. (2014). Detection of Radio Emission from Fireballs. The Astrophysical Journal Letters, 788(2), L26.

Clarke, T. E., Higgins, C. A., Skarda, J., Imai, K., Imai, M., Reyes, F., ... & Taylor, G. B. (2014). Probing Jovian decametric emission with the long wavelength array station 1. Journal of Geophysical Research: Space Physics, 119(12), 9508-9526.

Stovall, K., Ray, P. S., Blythe, J., Dowell, J., Eftekhari, T., Garcia, A., ... & Taylor, G. B. (2014). Pulsar Observations Using the First Station of the Long Wavelength Array and the LWA Pulsar Data Archive. arXiv preprint arXiv:1410.7422.

Fleharty, M. E., van Swol, F., & Petsev, D. N. (2014). The effect of surface charge regulation on conductivity in fluidic nanochannels. Journal of colloid and interface science, 416, 105-111.

Lushnikov, P. M., Rose, H. A., Silantyev, D. A., & Vladimirova, N. (2014). Vlasov multi-dimensional model dispersion relation. Physics of Plasmas (1994-present), 21(7), 072103.

Lushnikov, P. M., & Vladimirova, N. (2014). Nonlinear combining of laser beams. Optics Letters, 39(12), 3429-3432.

Ulyanova, Y., Babanova, S., Pinchon, E., Matanović, I., Singha, S., & Atanssov, P. (2014). Effect of enzymatic orientation through the use of syringaldazine molecules on multiple multi-copper oxidase enzymes, Physical Chemistry Chemical Physics, 16, 13367-13375.

Babanova, S., Matanovic, I., & Atanassov, P. (2014). Quinone‐modified surfaces for enhanced enzyme–electrode interactions in pyrroloquinoline‐quinone‐dependent glucose dehydrogenase anodes. ChemElectroChem, 1(11), 2017-2028.

Nami, M., & Feezell, D. F. (2014). Optical properties of plasmonic light-emitting diodes based on flip-chip III-nitride core-shell nanowires. Optics Express, 22(24), 29445-29455.

Nami, M., Wright, J., & Feezell, D. (2014). Investigation of purcell factor and light extraction efficiency in ag-coated GaN/InGaN core-shell nanowires. In: CLEO: Science and Innovations (pp. SM2J-4). Optical Society of America.

Clark, S. M., & Han, S. E. (2014). Two-dimensional metamaterial transparent metal electrodes for infrared optoelectronics. Optics Letters, 39(12), 3666-3669.

Han, S. E., & Clark, S. M. (2014). Optical properties of metamaterial serpentine metal electrodes. AIP Advances, 4(12), 123002.

Dawes, R., Jiang, B., & Guo, H. (2014). UV absorption spectrum and photodissociation channels of the simplest Criegee intermediate (CH2OO). Journal of the American Chemical Society, 137(1), 50-53.

Han, H., Li, A., & Guo, H. (2014). Toward spectroscopically accurate global ab initio potential energy surface for the acetylene-vinylidene isomerization. The Journal of chemical physics, 141(24), 244312.

Jiang, B., Li, J., & Guo, H. (2014). Effects of reactant rotational excitation on reactivity: Perspectives from the sudden limit. The Journal of chemical physics, 140(3), 034112.

Ma, J., Xie, C., Zhu, X., Yarkony, D. R., Xie, D., & Guo, H. (2014). Full-Dimensional Quantum Dynamics of Vibrationally Mediated Photodissociation of NH3 and ND3 on Coupled Ab Initio Potential Energy Surfaces: Absorption Spectra and NH2 (Ã2A1)/NH2 (X̃2B1) Branching Ratios. The Journal of Physical Chemistry A, 118(51), 11926-11934.

Li, Y., Suleimanov, Y. V., & Guo, H. (2014). Ring-polymer molecular dynamics rate coefficient calculations for insertion reactions: X+ H2→ HX+ H (X= N, O). The Journal of Physical Chemistry Letters, 5(4), 700-705.

Guo, H., & Jiang, B. (2014). The Sudden Vector Projection Model for Reactivity: Mode Specificity and Bond Selectivity Made Simple. Accounts of chemical research, 47(12), 3679-3685.

Ard, S. G., Li, A., Martinez Jr, O., Shuman, N. S., Viggiano, A. A., & Guo, H. (2014). Experimental and Theoretical Kinetics for the H2O++ H2/D2→ H3O+/H2DO++ H/D Reactions: Observation of the Rotational Effect in the Temperature Dependence. The Journal of Physical Chemistry A, 118(49), 11485-11489.

Jiang, B., & Guo, H. (2014). Prediction of mode specificity, bond selectivity, normal scaling, and surface lattice effects in water dissociative chemisorption on several metal surfaces using the sudden vector projection model. The Journal of Physical Chemistry C, 118(46), 26851-26858.

Jiang, B., & Guo, H. (2014). Six-dimensional quantum dynamics for dissociative chemisorption of H 2 and D 2 on Ag (111) on a permutation invariant potential energy surface. Physical Chemistry Chemical Physics, 16(45), 24704-24715.

Guo, H., Xie, D., & Yang, W. (2014). A tribute to Guosen Yan. Theoretical Chemistry Accounts, 133(12), 1-6.

Melko, J. J., Ard, S. G., Johnson, R. S., Shuman, N. S., Guo, H., & Viggiano, A. A. (2014). Temperature-Dependent Kinetics of Charge Transfer, Hydrogen-Atom Transfer, and Hydrogen-Atom Expulsion in the Reaction of CO+ with CH4 and CD4. The Journal of Physical Chemistry A, 118(37), 8141-8146.

Peterson, E. J., DeLaRiva, A. T., Lin, S., Johnson, R. S., Guo, H., Miller, J. T., ... & Datye, A. K. (2014). Low-temperature carbon monoxide oxidation catalysed by regenerable atomically dispersed palladium on alumina. Nature communications, 5.

Wang, Y., Li, J., Guo, H., & Yang, M. (2014). A comparison study of the H+ CH4 and H+ SiH4 reactions with eight-dimensional quantum dynamics: normal mode versus local mode in the reactant molecule vibration. Theoretical Chemistry Accounts, 133(10), 1-10.

Li, Y., Sun, Z., Jiang, B., Xie, D., Dawes, R., & Guo, H. (2014). Communication: Rigorous quantum dynamics of O+ O2 exchange reactions on an ab initio potential energy surface substantiate the negative temperature dependence of rate coefficients. The Journal of chemical physics, 141(8), 081102.

Liu, R., Wang, F., Jiang, B., Czakó, G., Yang, M., Liu, K., & Guo, H. (2014). Rotational mode specificity in the Cl+ CHD3→ HCl+ CD3 reaction. The Journal of chemical physics, 141(7), 074310.

Gao, J., Thomas, A. K., Johnson, R., Guo, H., & Grey, J. K. (2014). Spatially Resolving Ordered and Disordered Conformers and Photocurrent Generation in Intercalated Conjugated Polymer/Fullerene Blend Solar Cells. Chemistry of Materials, 26(15), 4395-4404.

Jiang, B., & Guo, H. (2014). Mode specificity, bond selectivity, and product energy disposal in X+ CH4/CHD3 (X= H, F, O (3P), Cl, and OH) hydrogen abstraction reactions: Perspective from Sudden Vector Projection model. Journal of the Chinese Chemical Society, 61(8), 847-859.

Van Wyngarden, A. L., Mar, K. A., Quach, J., Nguyen, A. P., Wiegel, A. A., Lin, S. Y., ... & Boering, K. A. (2014). The non-statistical dynamics of the 18O+ 32O2 isotope exchange reaction at two energies. The Journal of chemical physics, 141(6), 064311.

Wagner, A. F., Dawes, R., Continetti, R. E., & Guo, H. (2014). Theoretical/experimental comparison of deep tunneling decay of quasi-bound H (D) OCO to H (D)+ CO2. The Journal of chemical physics, 141(5), 054304.

Jiang, B., & Guo, H. (2014). Permutation invariant polynomial neural network approach to fitting potential energy surfaces. III. Molecule-surface interactions. The Journal of chemical physics, 141(3), 034109.

Li, J., Carter, S., Bowman, J. M., Dawes, R., Xie, D., & Guo, H. (2014). High-Level, First-principles, full-dimensional quantum calculation of the ro-vibrational spectrum of the simplest criegee intermediate (CH2OO). The Journal of Physical Chemistry Letters, 5(13), 2364-2369.

Zhao, B., Sun, Z., & Guo, H. (2014). Calculation of state-to-state differential and integral cross sections for atom-diatom reactions with transition-state wave packets. The Journal of chemical physics, 140(23), 234110.

Li, A., & Guo, H. (2014). A nine-dimensional ab initio global potential energy surface for the H2O++ H2→ H3O++ H reaction. The Journal of chemical physics, 140(22), 224313.

Loison, J. C., Hu, X., Han, S., Hickson, K. M., Guo, H., & Xie, D. (2014). An experimental and theoretical investigation of the N (4 S)+ C 2 (1 Σ g+) reaction at low temperature. Physical Chemistry Chemical Physics, 16(27), 14212-14219.

Wang, J., Li, J., Ma, J., & Guo, H. (2014). Full-dimensional characterization of photoelectron spectra of HOCO− and DOCO− and tunneling facilitated decay of HOCO prepared by anion photodetachment. The Journal of chemical physics, 140(18), 184314.

Hundt, P. M., Jiang, B., van Reijzen, M. E., Guo, H., & Beck, R. D. (2014). Vibrationally promoted dissociation of water on Ni (111). Science, 344(6183), 504-507.

Xie, C., Ma, J., Zhu, X., Zhang, D. H., Yarkony, D. R., Xie, D., & Guo, H. (2014). Full-Dimensional Quantum State-to-State Nonadiabatic Dynamics for Photodissociation of Ammonia in its A-Band. The Journal of Physical Chemistry Letters, 5(7), 1055-1060.

Xu, D., Cui, Q., & Guo, H. (2014). Quantum mechanical/molecular mechanical studies of zinc hydrolases. International Reviews in Physical Chemistry, 33(1), 1-41.

Guo, H., Ma, J., & Li, J. (2014). Tunneling in Unimolecular and Bimolecular Reactions. In Molecular Quantum Dynamics (pp. 59-80). Springer Berlin Heidelberg.

Ard, S. G., Melko, J. J., Ushakov, V. G., Johnson, R., Fournier, J. A., Shuman, N. S., ... & Viggiano, A. A. (2014). Activation of Methane by FeO+: Determining Reaction Pathways through Temperature-Dependent Kinetics and Statistical Modeling. The Journal of Physical Chemistry A, 118(11), 2029-2039.

Li, Y., Suleimanov, Y. V., Green, W. H., & Guo, H. (2014). Quantum rate coefficients and kinetic isotope effect for the reaction Cl+ CH4→ HCl+ CH3 from ring polymer molecular dynamics. The Journal of Physical Chemistry A, 118(11), 1989-1996.

Li, J., & Guo, H. (2014). A nine-dimensional global potential energy surface for NH 4 (X 2 A 1) and kinetics studies on the H+ NH 3↔ H 2+ NH 2 reaction. Physical Chemistry Chemical Physics, 16(14), 6753-6763.

Song, H., Li, J., Jiang, B., Yang, M., Lu, Y., & Guo, H. (2014). Effects of reactant rotation on the dynamics of the OH+ CH4→ H2O+ CH3 reaction: A six-dimensional study. The Journal of chemical physics, 140(8), 084307.

Li, J., Chen, J., Zhang, D. H., & Guo, H. (2014). Quantum and quasi-classical dynamics of the OH+ CO→ H+ CO2 reaction on a new permutationally invariant neural network potential energy surface. The Journal of chemical physics, 140(4), 044327.

Jiang, B., Li, J., & Guo, H. (2014). Effects of reactant rotational excitation on reactivity: Perspectives from the sudden limit. The Journal of chemical physics, 140(3), 034112.

Zhou, L., Xie, D., Sun, Z., & Guo, H. (2014). Product fine-structure resolved photodissociation dynamics: The A band of H2O. The Journal of chemical physics, 140(2), 024310.

Li, A., Li, Y., Guo, H., Lau, K. C., Xu, Y., Xiong, B., ... & Ng, C. Y. (2014). Communication: The origin of rotational enhancement effect for the reaction of H2O++ H2 (D2). The Journal of chemical physics, 140(1), 011102.

2013

Johnson, R. S., DeLaRiva, A., Ashbacher, V., Halevi, B., Villanueva, C. J., Smith, G. K., ... & Guo, H. (2013). The CO oxidation mechanism and reactivity on PdZn alloys. Physical Chemistry Chemical Physics, 15(20), 7768-7776.

Halasz, A. M., Lai, H. J., McCabe Pryor, M., Radhakrishnan, K., & Edwards, J. S. (2013). Analytical solution of steady-state equations for chemical reaction networks with bilinear rate laws. Computational Biology and Bioinformatics, IEEE/ACM Transactions on, 10(4), 957-969.

Chen,Y., Shor,t C., Halasz, A. M., Edwards, J. S., (2013). VEGF Signaling with One Receptor Cluster. Hybrid Systems and Biology.

Pryor, M. M., Low-Nam, S. T., Halász, Á. M., Lidke, D. S., Wilson, B. S., & Edwards, J. S. (2013). Dynamic transition states of ErbB1 phosphorylation predicted by spatial stochastic modeling. Biophysical journal, 105(6), 1533-1543.

Kaiser, B. E., Poroseva, S. V., Snider, M. A., Hovsapian, R. O., & Johnson, E. (2013). Flow Simulation Around a Rim-Driven Wind Turbine and in Its Wake. In ASME Turbo Expo 2013: Turbine Technical Conference and Exposition (pp. V008T44A001-V008T44A001). American Society of Mechanical Engineers.

Kaiser, B. E., Poroseva, S. V., Johnson, E., & Hovsapian, R. O. (2013). Near-Wake Flow Simulations for a Mid-Sized Rim Driven Wind Turbine. In the 31st AIAA Applied Aerodynamics Conference.

Gomez, S., Gilkey, L. N., Kaiser, B. E., & Poroseva, S. V. (2013). Computational analysis of a tip vortex structure shed from a bio-inspired blade. Bulletin of the American Physical Society, 58.

Vides, F., & Loring, T. A. (2013). Estimating norms of commutators. Experimental Mathematics, 24(1), 106-122.

Willman, C. L., Harvey, R., Davidson, G. S., Wang, X., Atlas, S. R., Bedrick, E. J., & Chen, I. L. (2013). Identification of novel subgroups of high-risk pediatric precursor B acute lymphoblastic leukemia, outcome correlations and diagnostic and therapeutic methods related to same. U.S. Patent No. 8,568,974. Washington, DC: U.S. Patent and Trademark Office.

Urtishak, K. A., Edwards, A. Y., Wang, Atlas, S. R., L. S., Hudome, A., Robinson, B. W., Barrett, J. S., ... & Felix, C. A. (2013). Potent obatoclax cytotoxicity and activation of triple death mode killing across infant acute lymphoblastic leukemia. Blood, 121(14), 2689-2703.

Ellingson, S. W., Taylor, G. B., Craig, J., Hartman, J., Dowell, J., Wolfe, C. N., ... & Weiler, K. W. (2013). The LWA1 radio telescope. Antennas and Propagation, IEEE Transactions on, 61(5), 2540-2549.

Helmboldt, J. F., Clarke, T. E., Craig, J., Ellingson, S. W., Hartman, J. M., Hicks, B. C., ... & Wolfe, C. N. (2013). Passive over-the-horizon radar with WWV and the first station of the Long Wavelength Array. Radio Sci., submitted.

Ellingson, S. W., Clarke, T. E., Craig, J., Hicks, B. C., Lazio, T. J. W., Taylor, G. B., ... & Wolfe, C. N. (2013). Observations of Crab Giant Pulses in 20-84 MHz using LWA1. The Astrophysical Journal, 768(2), 136.

Dowell, J., Ray, P. S., Taylor, G. B., Blythe, J. N., Clarke, T., Craig, J., ... & Wolfe, C. N. (2013). Detection and Flux Density Measurements of the Millisecond Pulsar J2145–0750 below 100 MHz. The Astrophysical Journal Letters, 775(1), L28.

Guba, O., Lorenz, J., & Sulsky, D. (2013). On Well-Posedness of the Viscous–Plastic Sea Ice Model. Journal of Physical Oceanography, 43(10), 2185-2199.

Lorenz, J. (2013). Deterministic and Random Evolution. New York, New York: Nova Science Pub.

Ott, R., & Lorenz, J. (2013). An Example of Self–Acceleration for Incompressible Flows. Boletim da Sociedade Paranaense de Matemática, 31(2), 149-159.

Zheng, W., Ackley, E. S., Martínez-Ramón, M., & Posse, S. (2013). Spatially aggregated multiclass pattern classification in functional MRI using optimally selected functional brain areas. Magnetic resonance imaging, 31(2), 247-261.

Dyachenko, S. A., Lushnikov, P. M., & Vladimirova, N. (2013). Logarithmic scaling of the collapse in the critical Keller–Segel equation. Nonlinearity, 26(11), 3011.

Lushnikov, P. M., Dyachenko, S. A., & Vladimirova, N. (2013). Beyond leading-order logarithmic scaling in the catastrophic self-focusing of a laser beam in Kerr media. Physical Review A, 88(1), 013845.

Miller, P., Vladimirova, N., & Falkovich, G. (2013). Oscillations in a turbulence-condensate system. Physical Review E, 87(6), 065202.

Steinkamp, M. P., Winner, K. K., Davies, S., Muller, C., Zhang, Y., Hoffman, R. M., ... & Wilson, B. S. (2013). Ovarian tumor attachment, invasion, and vascularization reflect unique microenvironments in the peritoneum: insights from xenograft and mathematical models. Frontiers in Oncology, 3.

Li, Y., Suleimanov, Y. V., Yang, M., Green, W. H., & Guo, H. (2012). Ring polymer molecular dynamics calculations of thermal rate constants for the O (3P)+ CH4→ OH+ CH3 reaction: Contributions of quantum effects. The Journal of Physical Chemistry Letters, 4(1), 48-52.

Li, J., Jiang, B., & Guo, H. (2013). Enhancement of Bimolecular Reactivity by a Pre-Reaction van der Waals Complex: the case of F+ H2O→ HF+ HO. Chemical Science, 4(2), 629-632.

Li, J., & Guo, H. (2013). Quasi‐classical Trajectory Study of F+ H2O→ HF+ OH Reaction: Influence of Barrier Height, Reactant Rotational Excitation, and Isotopic Substitution. Chinese Journal of Chemical Physics, 26(6), 627-634.

Jiang, B., & Guo, H. (2013). Competition between abstraction and exchange channels in H+ HCN reaction: Full-dimensional quantum dynamics. The Journal of chemical physics, 139(22), 224310.

Dawes, R., Lolur, P., Li, A., Jiang, B., & Guo, H. (2013). Communication: An accurate global potential energy surface for the ground electronic state of ozone. The Journal of chemical physics, 139(20), 201103.

Jiang, B., & Guo, H. (2013). Control of mode/bond selectivity and product energy disposal by the transition state: X+ H2O (X= H, F, O (3P), and Cl) reactions. Journal of the American Chemical Society, 135(40), 15251-15256.

Whitehill, A. R., Xie, C., Hu, X., Xie, D., Guo, H., & Ono, S. (2013). Vibronic origin of sulfur mass-independent isotope effect in photoexcitation of SO2 and the implications to the early earth’s atmosphere. Proceedings of the National Academy of Sciences, 110(44), 17697-17702.

Ard, S. G., Melko, J. J., Jiang, B., Li, Y., Shuman, N. S., Guo, H., & Viggiano, A. A. (2013). Temperature dependences for the reactions of O2− and O− with N and O atoms in a selected-ion flow tube instrument. The Journal of chemical physics, 139(14), 144302.

Nguyen, T. L., Li, J., Dawes, R., Stanton, J. F., & Guo, H. (2013). Accurate determination of barrier height and kinetics for the F+ H2O→ HF+ OH reaction. The Journal of Physical Chemistry A, 117(36), 8864-8872.

Gao, J., Roehling, J. D., Li, Y., Guo, H., Moulé, A. J., & Grey, J. K. (2013). The effect of 2, 3, 5, 6-tetrafluoro-7, 7, 8, 8-tetracyanoquinodimethane charge transfer dopants on the conformation and aggregation of poly (3-hexylthiophene). Journal of Materials Chemistry C, 1(36), 5638-5646.

Li, A., Guo, H., Sun, Z., Kłos, J., & Alexander, M. H. (2013). State-to-state quantum dynamics of the F+ HCl (vi= 0, ji= 0)→ HF (vf, jf)+ Cl reaction on the ground state potential energy surface. Physical Chemistry Chemical Physics, 15(37), 15347-15355.

Lin, S., Ye, X., Johnson, R. S., & Guo, H. (2013). First-principles investigations of metal (Cu, Ag, Au, Pt, Rh, Pd, Fe, Co, and Ir) doped hexagonal boron nitride nanosheets: stability and catalysis of CO oxidation. The Journal of Physical Chemistry C, 117(33), 17319-17326.

Li, Y., & Guo, H. (2013). Atomistic simulations of an antimicrobial molecule interacting with a model bacterial membrane. Theoretical Chemistry Accounts, 132(1), 1-8.

Jiang, B., Xie, D., & Guo, H. (2013). Vibrationally mediated bond selective dissociative chemisorption of HOD on Cu (111). Chemical Science, 4(1), 503-508.

Jiang, B., & Guo, H. (2013). Mode and bond selectivities in methane dissociative chemisorption: Quasi-classical trajectory studies on twelve-dimensional potential energy surface. The Journal of Physical Chemistry C, 117(31), 16127-16135.

Jiang, B., & Guo, H. (2013). Permutation invariant polynomial neural network approach to fitting potential energy surfaces. The Journal of chemical physics, 139(5), 054112.

Czakó, G., Liu, R., Yang, M., Bowman, J. M., & Guo, H. (2013). Quasiclassical Trajectory Studies of the O (3P)+ CX4 (vk= 0, 1)→ OX (v)+ CX3 (n 1 n 2 n 3 n 4)[X= H and D] Reactions on an Ab Initio Potential Energy Surface. The Journal of Physical Chemistry A, 117(30), 6409-6420.

Prozument, K., Shaver, R. G., Ciuba, M. A., Muenter, J. S., Park, G. B., Stanton, J. F., ... & Field, R. W. (2013). A new approach toward transition state spectroscopy. Faraday discussions, 163, 33-57.

Daranlot, J., Hu, X., Xie, C., Loison, J. C., Caubet, P., Costes, M., ... & Hickson, K. M. (2013). Low temperature rate constants for the N (4 S)+ CH (X 2 Π r) reaction. Implications for N 2 formation cycles in dense interstellar clouds. Physical Chemistry Chemical Physics, 15(33), 13888-13896.

Lin, S., Ma, J., Ye, X., Xie, D., & Guo, H. (2013). CO hydrogenation on Pd (111): competition between Fischer–Tropsch and oxygenate synthesis pathways. The Journal of Physical Chemistry C, 117(28), 14667-14676.

Xie, C., Hu, X., Zhou, L., Xie, D., & Guo, H. (2013). Ab initio determination of potential energy surfaces for the first two UV absorption bands of SO2. The Journal of chemical physics, 139(1), 014305.

Jiang, B., Liu, R., Li, J., Xie, D., Yang, M., & Guo, H. (2013). Mode selectivity in methane dissociative chemisorption on Ni (111). Chemical Science, 4(8), 3249-3254.

Li, A., Li, J., & Guo, H. (2013). Quantum manifestation of roaming in H+ MgH→ Mg+ H2: The birth of roaming resonances. The Journal of Physical Chemistry A, 117(24), 5052-5060.

Jiang, B., & Guo, H. (2013). Relative efficacy of vibrational vs. translational excitation in promoting atom-diatom reactivity: Rigorous examination of Polanyi's rules and proposition of sudden vector projection (SVP) model. The Journal of chemical physics, 138(23), 234104.

Allen, J. W., Green, W. H., Li, Y., Guo, H., & Suleimanov, Y. V. (2013). Communication: Full dimensional quantum rate coefficients and kinetic isotope effects from ring polymer molecular dynamics for a seven-atom reaction OH+ CH4→ CH3+ H2O. The Journal of chemical physics, 138(22), 221103.

Li, J., & Guo, H. (2013). A new ab initio based global HOOH (13A ″) potential energy surface for the O (3P)+ H2O (X1A1)↔ OH (X2Π)+ OH (X2Π) reaction. The Journal of chemical physics, 138(19), 194304.

Li, J., Li, Y., & Guo, H. (2013). Communication: Covalent nature of X⋯ H2O (X= F, Cl, and Br) interactions. The Journal of chemical physics, 138(14), 141102.

Halevi, B., Lin, S., Roy, A., Zhang, H., Jeroro, E., Vohs, J., ... & Datye, A. K. (2013). High CO2 Selectivity of ZnO Powder Catalysts for Methanol Steam Reforming. The Journal of Physical Chemistry C, 117(13), 6493-6503.

Li, Y., Suleimanov, Y. V., Li, J., Green, W. H., & Guo, H. (2013). Rate coefficients and kinetic isotope effects of the X+ CH4→ CH3+ HX (X= H, D, Mu) reactions from ring polymer molecular dynamics. The Journal of chemical physics, 138(9), 094307.

Li, J., Jiang, B., & Guo, H. (2013). Spin-orbit corrected full-dimensional potential energy surfaces for the two lowest-lying electronic states of FH2O and dynamics for the F+ H2O→ HF+ OH reaction. The Journal of chemical physics, 138(7), 074309.

Li, J., Jiang, B., & Guo, H. (2013). Reactant Vibrational Excitations Are More Effective than Translational Energy in Promoting an Early-Barrier Reaction F+ H2O→ HF+ OH. Journal of the American Chemical Society, 135(3), 982-985.

Jiang, B., Li, J., Xie, D., & Guo, H. (2013). Effects of reactant internal excitation and orientation on dissociative chemisorption of H2O on Cu (111): Quasi-seven-dimensional quantum dynamics on a refined potential energy surface. The Journal of chemical physics, 138(4), 044704.

Li, A., Xie, C., Xie, D., & Guo, H. (2013). State-to-state quantum dynamics of the O (3P)+ NH (X3Σ−) reaction on the three lowest-lying electronic states of HNO/HON. The Journal of chemical physics, 138(2), 024308.

2012

Michener, W. K., & Jones, M. B. (2012). Ecoinformatics: supporting ecology as a data-intensive science. Trends in ecology & evolution, 27(2), 85-93.

Michener, W. K., Allard, S., Budden, A., Cook, R. B., Douglass, K., Frame, M., ... & Vieglais, D. A. (2012). Participatory design of DataONE—enabling cyberinfrastructure for the biological and environmental sciences. Ecological Informatics, 11, 5-15.

Allard, S. (2012). DataONE: Facilitating eScience through collaboration. Journal of eScience Librarianship, 1(1), 3.

Espinoza, F. A., Wester, M. J., Oliver, J. M., Wilson, B. S., Andrews, N. L., Lidke, D. S., & Steinberg, S. L. (2012). Insights into Cell Membrane Microdomain Organization from Live Cell Single Particle Tracking of the IgE High Affinity Receptor FcϵRI of Mast Cells. Bulletin of mathematical biology,74(8), 1857-1911.

Archuleta, M. N., McDermott, J. E., Edwards, J. S., & Resat, H. (2012). An adaptive coarse graining method for signal transduction in three dimensions. Fundamenta informaticae, 118(4).

Singh, A. P., Andries, E., Edwards, J. S., & Steinberg, S. (2012). The Shuttling Scaffold Model for Prevention of Yeast Pheromone Pathway Misactivation. Bulletin of mathematical biology, 74(12), 2861-2874.

Snider, M. A., & Poroseva, S. V. (2012, August). Sensitivity study of turbulent flow simulations over a rotating disk. In 42nd AIAA Fluid Dynamics Conference and Exhibit Proceedings.

Taylor, G. B., Ellingson, S. W., Kassim, N. E., Craig, J., Dowell, J., Wolfe, C. N., ... & Wood, D. L. (2012). First light for the first station of the Long Wavelength Array. Journal of Astronomical Instrumentation, 1(01), 1250004.

Dowell, J., Wood, D., Stovall, K., Ray, P. S., Clarke, T., & Taylor, G. (2012). The long wavelength array software library. Journal of Astronomical Instrumentation, 1(01), 1250006.

Vladimirova, N., Derevyanko, S., & Falkovich, G. (2012). Phase transitions in wave turbulence. Physical Review E, 85(1), 010101.

Zhu, X., Ma, J., Yarkony, D. R., & Guo, H. (2012). Computational determination of the A state absorption spectrum of NH3 and of ND3 using a new quasi-diabatic representation of the X and A states and full six-dimensional quantum dynamics. The Journal of Chemical Physics, 136(23), 234301.

Lin, S., Xie, D., & Guo, H. (2012). First-principles study of the methyl formate pathway of methanol steam reforming on PdZn (111) with comparison to Cu (111). Journal of Molecular Catalysis A: Chemical, 356, 165-170.

Li, J., Wang, Y., Jiang, B., Ma, J., Dawes, R., Xie, D., ... & Guo, H. (2012). Communication: A chemically accurate global potential energy surface for the HO+ CO→ H+ CO2 reaction. The Journal of Chemical Physics, 136(4), 041103.

Corchado, J. C., Espinosa-Garcia, J., Li, J., & Guo, H. (2012). CO2 Vibrational State Distributions From Quasi-Classical Trajectory Studies of the HO+ CO→ H+ CO2 Reaction and H+ CO2 Inelastic Collision. The Journal of Physical Chemistry A, 117(46), 11648-11654.

Liu, R., Yang, M., Czakó, G., Bowman, J. M., Li, J., & Guo, H. (2012). Mode selectivity for a “central” barrier reaction: Eight-dimensional quantum studies of the O (3P)+ CH4→ OH+ CH3 reaction on an ab initio potential energy surface. The Journal of Physical Chemistry Letters, 3(24), 3776-3780.

Zhou, L., Jiang, B., Xie, D., & Guo, H. (2012). State-to-state photodissociation dynamics of H2O in the B-band: competition between two coexisting nonadiabatic pathways. The Journal of Physical Chemistry A, 117(32), 6940-6947.

Lin, S., Ma, J., Zhou, L., Huang, C., Xie, D., & Guo, H. (2012). Influence of step defects on methanol decomposition: periodic density functional studies on Pd (211) and kinetic Monte Carlo simulations. The Journal of Physical Chemistry C, 117(1), 451-459.

Li, J., Dawes, R., & Guo, H. (2012). An ab initio based full-dimensional global potential energy surface for FH2O (X2A′) and dynamics for the F+ H2O→ HF+ HO reaction. The Journal of chemical physics, 137(9), 094304.

Ma, J., Zhu, X., Guo, H., & Yarkony, D. R. (2012). First principles determination of the NH2/ND2 (Ã, X̃) branching ratios for photodissociation of NH3/ND3 via full-dimensional quantum dynamics based on a new quasi-diabatic representation of coupled ab initio potential energy surfaces. The Journal of chemical physics, 137(22), 22A541.

Ma, J., Li, J., & Guo, H. (2012). Tunneling Facilitated Dissociation to H+ CO 2 in HOCO− Photodetachment. Physical review letters, 109(6), 063202.

Li, J., Xie, C., Ma, J., Wang, Y., Dawes, R., Xie, D., ... & Guo, H. (2012). Quasi-Classical Trajectory Study of the HO+ CO→ H+ CO2 Reaction on a New ab Initio Based Potential Energy Surface. The Journal of Physical Chemistry A,116(21), 5057-5067.

Jiang, B., Ren, X., Xie, D., & Guo, H. (2012). Enhancing dissociative chemisorption of H2O on Cu (111) via vibrational excitation. Proceedings of the National Academy of Sciences, 109(26), 10224-10227.

2011

Tenopir, C., Allard, S., Douglass, K., Aydinoglu, A. U., Wu, L., Read, E., ... & Frame, M. (2011). Data sharing by scientists: practices and perceptions. PloS one, 6(6), e21101.

Michener, W., Vieglais, D., Vision, T., Kunze, J., Cruse, P., & Janée, G. (2011). Dataone: Data observation network for earth-preserving data and enabling innovation in the biological and environmental sciences. D-Lib Magazine, 17(1), 3.

Reichman, O. J., Jones, M. B., & Schildhauer, M. P. (2011). Challenges and opportunities of open data in ecology. Science, 331(6018).

Costa, M. N., Radhakrishnan, K., & Edwards, J. S. (2011). Monte Carlo simulations of plasma membrane corral-induced EGFR clustering. Journal of biotechnology, 151(3), 261-270.

Zhou, Y. E., O’rourke, J. P., Edwards, J. S., & Ness, S. A. (2011). Single molecule analysis of c-Myb alternative splicing reveals novel classifiers for precursor B-ALL. PloS one, 6(8), e22880.

Ho, A., Murphy, M., Wilson, S., Atlas, S. R., & Edwards, J. S. (2011). Sequencing by ligation variation with endonuclease V digestion and deoxyinosine-containing query oligonucleotides. BMC genomics, 12(1), 598.

Nilmeier, J., Hua, L., Coutsias, E. A., & Jacobson, M. P. (2011). Assessing protein loop flexibility by hierarchical Monte Carlo sampling. Journal of chemical theory and computation, 7(5), 1564-1574.

Ko, J., Lee, D., Park, H., Coutsias, E. A., Lee, J., & Seok, C. (2011). The FALC-Loop web server for protein loop modeling. Nucleic acids research, gkr352.

Erdei, E., Sheng, H., Maestas, E., Mackey, A., White, K. A., Li, L., ... & Morse, D. E. (2011). Self-reported ethnicity and genetic ancestry in relation to oral cancer and pre-cancer in Puerto Rico. PloS one, 6(8), e23950.

Meng, X., Matlawska-Wasowska, K., Girodon, F., Mazel, T., Willman, C. L., Atlas, S., ... & Wilson, B. S. (2011). GSI-I (Z-LLNle-CHO) inhibits γ-secretase and the proteosome to trigger cell death in precursor-B acute lymphoblastic leukemia. Leukemia, 25(7), 1135-1146.

Guba, O., & Lorenz, J. (2011). Continuous spectra and numerical eigenvalues. Mathematical and Computer Modelling, 54(11), 2616-2622.

Ke, Z., Guo, H., Xie, D., Wang, S., & Zhang, Y. (2011). Ab initio QM/MM free-energy studies of arginine deiminase catalysis: the protonation state of the Cys nucleophile. The Journal of Physical Chemistry B, 115(13), 3725-3733.

Li, Z., Xie, C., Jiang, B., Xie, D., Liu, L., Sun, Z., ... & Guo, H. (2011). Quantum and quasiclassical state-to-state dynamics of the NH+ H reaction: Competition between abstraction and exchange channels. The Journal of Chemical Physics, 134(13), 134303.

Lin, S., Johnson, R. S., Smith, G. K., Xie, D., & Guo, H. (2011). Pathways for methanol steam reforming involving adsorbed formaldehyde and hydroxyl intermediates on Cu (111): density functional theory studies. Physical Chemistry Chemical Physics, 13(20), 9622-9631.

Wang, X., Wu, S., Xu, D., Xie, D., & Guo, H. (2011). Inhibitor and substrate binding by angiotensin-converting enzyme: quantum mechanical/molecular mechanical molecular dynamics studies. Journal of Chemical Information and Modeling, 51(5), 1074-1082.

Li, A., Xie, C., Xie, D., & Guo, H. (2011). A global ab initio potential energy surface for HNO (a3A ″) and quantum mechanical studies of vibrational states and reaction dynamics. The Journal of Chemical Physics, 134(19), 194309.

Wang, L., Xie, D., Guo, H., Li, H., Le Roy, R. J., & Roy, P. N. (2011). Superfluid response of 4 HeN–N 2 O clusters probed by path integral Monte Carlo simulations. Journal of Molecular Spectroscopy, 267(1), 136-143.

Jiang, B., Xie, D., & Guo, H. (2011). Communication: State-to-state differential cross sections for H2O (B̃) photodissociation. The Journal of chemical physics,134(23), 231103.

Johnson, C. M., Monzingo, A. F., Ke, Z., Yoon, D. W., Linsky, T. W., Guo, H., ... & Fast, W. (2011). On the mechanism of dimethylarginine dimethylaminohydrolase inactivation by 4-halopyridines. Journal of the American Chemical Society, 133(28), 10951-10959.

Ke, Z., Smith, G. K., Zhang, Y., & Guo, H. (2011). Molecular mechanism for eliminylation, a newly discovered post-translational modification. Journal of the American Chemical Society, 133(29), 11103-11105.

Ma, J., & Guo, H. (2011). Full-dimensional quantum state resolved predissociation dynamics of HCO 2 prepared by photodetaching HCO 2−. Chemical Physics Letters, 511(4), 193-195.

Dawes, R., Lolur, P., Ma, J., & Guo, H. (2011). Communication: Highly accurate ozone formation potential and implications for kinetics. The Journal of Chemical Physics, 135(8), 081102.

Jiang, B., Xie, D., & Guo, H. (2011). Calculation of multiple initial state selected reaction probabilities from Chebyshev flux-flux correlation functions: Influence of reactant internal excitations on H+ H2O→ OH+ H2. The Journal of Chemical Physics, 135(8), 084112.

Wu, S., Zhang, C., Cao, R., Xu, D., & Guo, H. (2011). pH-Dependent reactivity for glycyl-L-tyrosine in carboxypeptidase-A-catalyzed hydrolysis. The Journal of Physical Chemistry B, 115(34), 10360-10367.

Lin, S., Xie, D., & Guo, H. (2011). Methyl Formate Pathway in Methanol Steam Reforming on Copper: Density Functional Calculations. Acs Catalysis, 1(10), 1263-1271.

Lin, S., Xie, D., & Guo, H. (2011). Pathways of methanol steam reforming on PdZn and comparison with Cu. The Journal of Physical Chemistry C

Smith, G. K., Ke, Z., Guo, H., & Hengge, A. C. (2011). Insights into the phosphoryl transfer mechanism of cyclin-dependent protein kinases from ab initio QM/MM free-energy studies. The Journal of Physical Chemistry B(46), 13713-13722. The Journal of Physical Chemistry B,115(46), 13713-13722.

Thomas, P. W., Zheng, M., Wu, S., Guo, H., Liu, D., Xu, D., & Fast, W. (2011). Characterization of purified New Delhi metallo-β-lactamase-1. Biochemistry (46), 10102-10113.

Daranlot, J., Jorfi, M., Xie, C., Bergeat, A., Costes, M., Caubet, P., ... & Hickson, K. M. (2011). Revealing atom-radical reactivity at low temperature through the N+ OH reaction. Science, 334(6062), 1538-1541.

2010

Lombardi, P., & Wester, M. J. (2010). Serial mistakes in Stravinsky’s Requiem Canticles. Mathematics and Computers in Simulation, 80(6), 1185-1199.

Hsieh, M. Y., Yang, S., Raymond-Stinz, M. A., Edwards, J. S., & Wilson, B. S. (2010). Spatio-temporal modeling of signaling protein recruitment to EGFR. BMC systems biology, 4(1), 57.

Martin, S., Thompson, A., Coutsias, E. A., & Watson, J. P. (2010). Topology of cyclo-octane energy landscape. The journal of chemical physics, 132(23), 234115.

Lee, J., Lee, D., Park, H., Coutsias, E. A., & Seok, C. (2010). Protein loop modeling by using fragment assembly and analytical loop closure. Proteins: Structure, Function, and Bioinformatics, 78(16), 3428-3436.

Kang, H., Wilson, C. S., Harvey, R. C., Chen, I., Murphy, M. H., Atlas, S. R., ... & Willman, C. L. (2010, November). Gene Expression Profiling Reveals Genes Predictive of Outcome In Infant Acute Lymphoblastic Leukemia (ALL) and Distinctive Age-Related Gene Expression Profiles (< 90 Days vs.> 90 Days): A Children's Oncology Group Study. In BLOOD (Vol. 116, No. 21, pp. 183-184). 1900 M STREET. NW SUITE 200, WASHINGTON, DC 20036 USA: AMER SOC HEMATOLOGY.

Harvey, R. C., Mullighan, C. G., Wang, X., Dobbin, K. K., Davidson, G. S., Bedrick, E. J., Atlas, S. R., ... & Willman, C. L. (2010). Identification of novel cluster groups in pediatric high-risk B-precursor acute lymphoblastic leukemia with gene expression profiling: correlation with genome-wide DNA copy number alterations, clinical characteristics, and outcome. Blood, 116(23), 4874-4884.

Kang, H., Chen, I. M., Wilson, C. S., Bedrick, E. J., Harvey, R. C., Atlas, S. R., ... & Willman, C. L. (2010). Gene expression classifiers for relapse-free survival and minimal residual disease improve risk classification and outcome prediction in pediatric B-precursor acute lymphoblastic leukemia. Blood, 115(7), 1394-1405.

Lushnikov, P. M., & Vladimirova, N. (2010). Non-Gaussian statistics of multiple filamentation. Optics Letters, 35(12), 1965-1967.

Sun, Z., Liu, L., Lin, S. Y., Schinke, R., Guo, H., & Zhang, D. H. (2010). State-to-state quantum dynamics of O + O₂ isotope exchange reactions reveals non-statistical behavior at atmospheric conditions. Proceedings of the National Academy of Sciences, 107(2), 555-558.

Sun, Z., Guo, H., & Zhang, D. H. (2010). Extraction of state-to-state reactive scattering attributes from wave packet in reactant Jacobi coordinates. Journal of Chemical Physics, 132, 084112.

Wu, S., Zhang, C., Xu, D., & Guo, H. (2010). Catalysis of carboxypeptidase A: Promoted water vs. nucleophilic pathways. The Journal of Physical Chemistry B, 114(28), 9259-9267.

Ma, J., Lin, S. Y., Guo, H., Sun, Z., Zhang, D. H., & Xie, D. (2010). State-to-state quantum dynamics of the O(3P) + OH(2Π) → H(2S) + O2(3Σ-g) reaction. Journal of Chemical Physics, 133, 054302 (cover article and one of 20 most-read articles in Journal of Chemical Physics 2010).

Lin, S. Y., Guo, H., Jiang, B., Zhou, S., & Xie, D. (2010). Non-Born-Oppenheimer state-to-state dynamics of the N(2D) + H₂ → NH( ) + H reaction: Influence of the Renner-Teller coupling. The Journal of Physical Chemistry A, 114(36), 9655-9661 (invited article in the Schinke Festschrift).

Li, A., Xie, D., Dawes, R., Jasper, A. W., Ma, J., & Guo, H. (2010). Global potential energy surface, vibrational spectrum, and reaction dynamics of the first excited (Ã A2′) state of HO2. The Journal of Chemical Physics, 133(14), 144306.

Wu, S., Xu, D., & Guo, H. (2010). QM/MM studies of mono-zinc β-lactamase CphA suggest that the crystal structure of an enzyme-intermediate complex represents a minor pathway. Journal of the American Chemical Society, 132(51), 17986-17988.

2009

Lai, W., Lin, S. Y., Xie, D., & Guo, H. (2009). Nonadiabatic Dynamics of Ã-State Photodissociation of Ammonia: A Four-Dimensional Wave Packet Study. The Journal of Physical Chemistry A, 114(9), 3121-3126.

Radhakrishnan, K., Edwards, J. S., Lidke, D. S., Jovin, T. M., Wilson, B. S., & Oliver, J. M. (2009). Sensitivity analysis predicts that the ERK–pMEK interaction regulates ERK nuclear translocation. IET systems biology, 3(5), 329-341.

Mullighan, C. G., Zhang, J., Harvey, R. C., Collins-Underwood, Atlas, S. R., J. R., Schulman, B. A., Phillips, L. A., ... & Willman, C. L. (2009). JAK mutations in high-risk childhood acute lymphoblastic leukemia. Proceedings of the National Academy of Sciences, 106(23), 9414-9418.

Costa, M. N., Radhakrishnan,R., Wilson,B., Vlachos,D.G., Edwards, J. S., (2009). The Importance of Spatial Organization in ErbB Signal Transduction. PLoS One.

2008

Beyn, W. J., & Lorenz, J. (2008). Nonlinear stability of rotating patterns. Dynamics of Partial Differential Equations, 5(4), 349-400.